The genus Crocus, series Crocus (Iridaceae) in Turkey and 2 East Aegean islands: a genetic approach

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dc.authorid0000-0003-2113-5046
dc.authorid0000-0003-2113-5046
dc.authorscopusid7005360857
dc.authorscopusid55882186300
dc.authorscopusid26641332400
dc.authorscopusid57225437022
dc.authorscopusid57196823285
dc.authorscopusid6507409829
dc.authorwosidTuna, Metin/ABA-4295-2020
dc.authorwosidCan, Levent/E-3590-2016
dc.authorwosidTanyolac, Bahattin/AAD-3762-2019
dc.authorwosidEROL, Osman/AAF-9902-2019
dc.authorwosidCan, Levent/H-6477-2019
dc.contributor.authorErol, Osman
dc.contributor.authorKaya, Hilal Betul
dc.contributor.authorSik, Levent
dc.contributor.authorTuna, Metin
dc.contributor.authorCan, Levent
dc.contributor.authorTanyolac, Muhammed Bahattin
dc.date.accessioned2022-05-11T14:14:23Z
dc.date.available2022-05-11T14:14:23Z
dc.date.issued2014
dc.departmentFakülteler, Fen Edebiyat Fakültesi, Biyoloji Bölümü
dc.departmentFakülteler, Ziraat Fakültesi, Tarla Bitkileri Bölümü
dc.description.abstractIn this study, a total of 26 Crocus specimens from different locations across Turkey and 2 East Aegean islands (Chios and Samos) were analyzed using 12 amplified fragment length polymorphism (AFLP) primer combinations to obtain information on genetic diversity, population structure, and genetic relationships. A total of 369 polymorphic AFLP bands were generated and scored as binary data. Genetic similarities were determined. Cluster analysis revealed 4 major groups among the 26 genotypes examined in this study. The nuclear DNA contents (2C) of the 26 Crocus specimens were found to range from 5.08 pg in C. asumaniae to 9.75 pg in C. sativus. Polymorphic information content (PIC) values were used to examine the capacity of the various primer pairs to amplify polymorphisms in the Crocus specimens. The PIC values ranged from 0.218 (M-CAA/E-AGC) to 0.512 (M-CAT/E-AAG) and showed an average of 0.34. In sum, we herein used AFLP analysis to identify a high level of polymorphism among Crocus specimens collected from various locations in Turkey and Greece, and our structural analysis yielded 2 reconstructed populations. These findings provide new insight into the relationships among different Crocus genotypes and show that AFLP analysis can be useful for Crocus diversity studies.
dc.description.sponsorshipResearch Fund of Istanbul University, Istanbul, TurkeyIstanbul University [27545]
dc.description.sponsorshipThe first author is grateful to Dr Janis Ruksans for sharing his knowledge of the genus Crocus and for kindly sending specimens from Greece. We thank Prof Dr Orhan Kucuker (ISTF) for his scientific advice. We also thank MSc Almila Ciftci (ISTF) for preparing herbarium specimens. This work was supported by the Research Fund of Istanbul University, Istanbul, Turkey (project number: 27545).
dc.identifier.doi10.3906/biy-1305-14
dc.identifier.endpage62
dc.identifier.issn1300-0152
dc.identifier.issn1303-6092
dc.identifier.issue1en_US
dc.identifier.scopus2-s2.0-84888986167
dc.identifier.scopusqualityQ2
dc.identifier.startpage48
dc.identifier.urihttps://doi.org/10.3906/biy-1305-14
dc.identifier.urihttps://hdl.handle.net/20.500.11776/5885
dc.identifier.volume38
dc.identifier.wosWOS:000329169300006
dc.identifier.wosqualityQ3
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.institutionauthorTuna, Metin
dc.institutionauthorCan, Levent
dc.language.isoen
dc.publisherTubitak Scientific & Technical Research Council Turkey
dc.relation.ispartofTurkish Journal of Biology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectAmplified fragment length polymorphism
dc.subjectCrocus
dc.subjectgenetic diversity
dc.subjectgenetic structure
dc.subjectnuclear DNA content
dc.subjectDna-Content Variability
dc.subjectGenome Size Variation
dc.subjectPopulation-Structure
dc.subjectMicrosatellite Markers
dc.subjectNuclear-Dna
dc.subjectMolecular Characterization
dc.subjectSativus L.
dc.subjectDiversity
dc.subjectAflp
dc.subjectFestuca
dc.titleThe genus Crocus, series Crocus (Iridaceae) in Turkey and 2 East Aegean islands: a genetic approach
dc.typeArticle

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