Genetic characterization of Orobanche cumana populations from the thrace region of Turkey using microsatellite markers

Basit Öğe Kaydı
dc.authorscopusid22936704800
dc.authorscopusid57205502731
dc.authorscopusid25029636100
dc.contributor.authorBilgen, Behiye Banu
dc.contributor.authorBarut, A.K.
dc.contributor.authorDemirbaş, Sefer
dc.date.accessioned2022-05-11T14:07:11Z
dc.date.available2022-05-11T14:07:11Z
dc.date.issued2019
dc.departmentFakülteler, Ziraat Fakültesi, Tarımsal Biyoteknoloji Bölümü
dc.description.abstractOrobanche cumana is a parasitic plant that can lead to advanced losses in yield of agricultural lands cultivating sunflower, depending on the sunflower varieties and the level of contamination. In our study, genetic diversity of six O. cumana populations from the Thrace region of Turkey was determined with the help of eight SSR (microsatellite) loci. All SSR loci were polymorphic. A total of 23 alleles were determined for the analyzed 120 samples. Allele number of each SSR locus ranged from two to six. Mean number of alleles (N a = 2.271), effective allele number (N e = 1.667), Shannon’s information index (I = 0.547), and heterozygosity levels (H o = 0.207 and H e = 0.340) were calculated. A high proportion of the genetic variation (66%) was due to within-population variation and 34% of the diversity was due to among-population variations. Based on the UPGMA dendrogram and STRUCTURE analysis, there were two main clusters. Cluster I was classified into three groups containing four populations from the Kırklareli and Edirne regions. Two populations from Tekirdağ were in cluster II. The information obtained from this study is valuable to provide a significant contribution to studies on the genetic structure, diversity, and race evolution of O. cumana and to the developed crop breeding studies and management strategies for controlling O. cumana infestation. © TÜBİTAK.
dc.identifier.doi10.3906/bot-1807-71
dc.identifier.endpage47
dc.identifier.issn1300-008X
dc.identifier.issue1en_US
dc.identifier.scopus2-s2.0-85060308840
dc.identifier.scopusqualityQ2
dc.identifier.startpage38
dc.identifier.urihttps://doi.org/10.3906/bot-1807-71
dc.identifier.urihttps://hdl.handle.net/20.500.11776/4999
dc.identifier.volume43
dc.identifier.wosWOS:000455606900003
dc.identifier.wosqualityQ3
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.institutionauthorBilgen, Behiye Banu
dc.institutionauthorBarut, A.K.
dc.institutionauthorDemirbaş, Sefer
dc.language.isoen
dc.publisherTurkiye Klinikleri Journal of Medical Sciences
dc.relation.ispartofTurkish Journal of Botany
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectBroomrape
dc.subjectHelianthus annuus
dc.subjectMolecular marker analysis
dc.subjectSimple sequence repeats
dc.subjectbiomarker
dc.subjectbreeding
dc.subjectgenetic analysis
dc.subjectgenetic variation
dc.subjectmolecular analysis
dc.subjectparasitic plant
dc.subjectpollution effect
dc.subjectpopulation genetics
dc.subjectThrace
dc.subjectTurkey
dc.subjectHelianthus
dc.subjectHelianthus annuus
dc.subjectOrobanchaceae
dc.subjectOrobanche cernua var. cumana
dc.titleGenetic characterization of Orobanche cumana populations from the thrace region of Turkey using microsatellite markers
dc.typeArticle

Dosyalar

Orijinal paket
Listeleniyor 1 - 1 / 1
Küçük Resim
İsim:
4999.pdf
Boyut:
5.48 MB
Biçim:
Adobe Portable Document Format
Açıklama:
Tam Metin / Full Text
İndir

Koleksiyon

WoS İndeksli Yayınlar Koleksiyonu
Scopus İndeksli Yayınlar Koleksiyonu
TR-Dizin İndeksli Yayınlar Koleksiyonu
Ziraat Fakültesi Koleksiyonu