Characterization of Pseudomonas cichorii Isolated from Different Hosts in Turkey

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dc.authorid0000-0002-5651-6597
dc.authorwosidAYSAN, YESIM/F-1962-2018
dc.authorwosidMIRIK, Mustafa/ABA-6320-2020
dc.contributor.authorMırık, Mustafa
dc.contributor.authorAysan, Yeşim
dc.contributor.authorŞahin, Fikrettin
dc.date.accessioned2022-05-11T14:43:28Z
dc.date.available2022-05-11T14:43:28Z
dc.date.issued2011
dc.departmentFakülteler, Ziraat Fakültesi, Bitki Koruma Bölümü
dc.description.abstractStem and pith necrosis symptoms on tomato, varnish spot symptoms on lettuce and leaf spot symptoms on dwarf umbrella trees were observed in late winter and spring of 2002 and 2008 in the Eastern Mediterranean region of Turkey. Fluorescent bacteria were isolated from typical diseased plants on King's medium B as nearly pure cultures. All of the bacterial strains isolated in the study were identified as Pseudomonas cichorii compared with reference strains GSPB 2097, CFPB 2102 and NCPPB 3802, based on conventional methods, ELISA and fatty acid methyl ester analysis. The strains were divided into five different groups according to cluster analysis of fatty acid compositions in phenotypic characterization of the strains. In sensitive assays, tomato, lettuce and dwarf umbrella trees strains are sensitive to cupric sulfate and streptomycin. The study also demonstrated that P. cichorii strains isolated from tomato, lettuce and dwarf umbrella trees can be distinguished based on BOX-PCR experiments in genotypic characterization of the strains. In pathogenicity tests, tomato and lettuce strains were more aggressive on tomato, lettuce and dwarf umbrella trees, while dwarf umbrella trees strains were pathogenic only on their host. When strains were inoculated to their original host, they were more aggressive on their host than on other species. This is the first detail study of P. cichorii causing stem and pith necrosis on tomato, bacterial rot and varnish spot on lettuce and leaf spot on dwarf umbrella trees in Turkey. (C) 2011 Friends Science Publishers
dc.description.sponsorshipCukurova UniversityCukurova University [ZF2006BAP10]; TUBITAKTurkiye Bilimsel ve Teknolojik Arastirma Kurumu (TUBITAK) [TOVAG 106O333]
dc.description.sponsorshipThis study was supported by Cukurova University with a Project No. ZF2006BAP10 and TUBITAK with a Project nr TOVAG 106O333. We thank Dr. F. Yucel for polyclonal antiserum studies (Genetic Engineering and Biotechnology Research Institute of Turkish Scientific and Technical Research Society, Gebze-Kocaeli, Turkey). The authors wish to thanks Dr. M. Mink (Texas A & M Univ. Syst, Texas AgriLife Res, Vernon, TX 76385 USA) for critical review of manuscript and Dr. K. Rudolph (Georg-August University Gottingen, Germany), Dr. L. Sutra (France) and Dr. S. Tokgonul for providing reference strains, GSPB 2097, CFPB 2101 and NCPPB 3802, respectively.
dc.identifier.endpage209
dc.identifier.issn1560-8530
dc.identifier.issn1814-9596
dc.identifier.issue2en_US
dc.identifier.scopus2-s2.0-79951935694
dc.identifier.scopusqualityQ3
dc.identifier.startpage203
dc.identifier.urihttps://hdl.handle.net/20.500.11776/9615
dc.identifier.volume13
dc.identifier.wosWOS:000287722500009
dc.identifier.wosqualityQ2
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.institutionauthorMırık, Mustafa
dc.language.isoen
dc.publisherFriends Science Publ
dc.relation.ispartofInternational Journal of Agriculture and Biology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectTomato
dc.subjectLettuce
dc.subjectDwarf umbrella trees
dc.subjectFAME
dc.subjectPCR
dc.subjectBOX-PCR
dc.subjectPhenotypic & genotypic relationship
dc.subjectBacterial Leaf-Spot
dc.subjectSchefflera-Arboricola
dc.subjectXanthomonas
dc.subjectStrains
dc.subjectBlight
dc.titleCharacterization of Pseudomonas cichorii Isolated from Different Hosts in Turkey
dc.typeArticle

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