POPULATION STRUCTURE AND LINKAGE DISEQUILIBRIUM ANALYSES OF MODEL PLANT Brachypodium distachion THROUGH iPBS MARKERS

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dc.authorscopusid57220194986
dc.authorscopusid57188676588
dc.authorscopusid57225437022
dc.authorscopusid6507409829
dc.contributor.authorGüner, Pınar
dc.contributor.authorAteş, Duygu
dc.contributor.authorTuna, Metin
dc.contributor.authorTanyolac, Muhammed Bahattin
dc.date.accessioned2022-05-11T14:45:55Z
dc.date.available2022-05-11T14:45:55Z
dc.date.issued2020
dc.departmentFakülteler, Ziraat Fakültesi, Tarla Bitkileri Bölümü
dc.description.abstractIn the current study, a total of 235 genotypes of Brachypodium distachyon (BD) were studied and targeted to evaluate the genetic diversity, population structure and relative kinship of these genotypes using inter-primer binding site (iPBS) markers. Twenty-eight iPBS markers were used, and 184 clear and sharp polymorphic bands were produced. The polymorphism information content and diversity parameters indicated the existence of an appropriate amount of genetic diversity in the analysed genotypes. The results of the dendrogram with heat map and principal component analysis (PCoA) revealed that 235 BD genotypes were grouped into two separate clusters. The population structure was calculated using the STRUCTURE software, and two major sub-groups (K = 2) were established. A total of 95.1% of the relative kinship estimates being less than 0.4 for all genotypes. The findings of this study concluded that iPBS markers are highly polymorphic and are very efficient in the evaluation of the genetic diversity of B. distachyon.
dc.identifier.doi10.17557/tjfc.834403
dc.identifier.endpage253
dc.identifier.issn1301-1111
dc.identifier.issue2en_US
dc.identifier.scopus2-s2.0-85097229162
dc.identifier.scopusqualityQ3
dc.identifier.startpage245
dc.identifier.urihttps://doi.org/10.17557/tjfc.834403
dc.identifier.urihttps://hdl.handle.net/20.500.11776/10180
dc.identifier.volume25
dc.identifier.wosWOS:000620972300019
dc.identifier.wosqualityQ4
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.institutionauthorTuna, Metin
dc.language.isoen
dc.publisherSoc Field Crop Sci
dc.relation.ispartofTurkish Journal of Field Crops
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectBrachypodium distachyon
dc.subjectgenetic diversity
dc.subjectinter-primer binding site (iPBS)
dc.subjectlinkage disequilibrium
dc.subjectpopulation structure
dc.subjectMolecular Diversity Analysis
dc.subjectGenetic Diversity
dc.subjectAccessions
dc.subjectIssr
dc.subjectSelection
dc.subjectUtility
dc.subjectSystem
dc.titlePOPULATION STRUCTURE AND LINKAGE DISEQUILIBRIUM ANALYSES OF MODEL PLANT Brachypodium distachion THROUGH iPBS MARKERS
dc.typeArticle

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