Antimicrobial resistance determinants in silage

dc.authorscopusid57193135879
dc.authorscopusid57216652202
dc.authorscopusid57204786745
dc.authorscopusid56949758800
dc.authorscopusid55921128200
dc.contributor.authorNagy, Sara Agnes
dc.contributor.authorToth, Adrienn Greta
dc.contributor.authorPapp, Marton
dc.contributor.authorKaplan, Selçuk
dc.contributor.authorSolymosi, Norbert
dc.date.accessioned2022-05-11T14:07:13Z
dc.date.available2022-05-11T14:07:13Z
dc.date.issued2022
dc.departmentFakülteler, Ziraat Fakültesi, Tarımsal Biyoteknoloji Bölümü
dc.description.abstractAnimal products may play a role in developing and spreading antimicrobial resistance in several ways. On the one hand, residues of antibiotics not adequately used in animal farming can enter the human body via food. However, resistant bacteria may also be present in animal products, which can transfer the antimicrobial resistance genes (ARG) to the bacteria in the consumer's body by horizontal gene transfer. As previous studies have shown that fermented foods have a meaningful ARG content, it is indicated that such genes may also be present in silage used as mass feed in the cattle sector. In our study, we aspired to answer what ARGs occur in silage and what mobility characteristics they have? For this purpose, we have analyzed bioinformatically 52 freely available deep sequenced silage samples from shotgun metagenome next-generation sequencing. A total of 16 perfect matched ARGs occurred 54 times in the samples. More than half of these ARGs are mobile because they can be linked to integrative mobile genetic elements, prophages or plasmids. Our results point to a neglected but substantial ARG source in the food chain.
dc.description.sponsorshipUniversity of Veterinary Medicine
dc.description.sponsorshipOpen access funding provided by University of Veterinary Medicine.
dc.identifier.doi10.1038/s41598-022-09296-5
dc.identifier.issn2045-2322
dc.identifier.issue1en_US
dc.identifier.pmid35347213
dc.identifier.scopus2-s2.0-85127240561
dc.identifier.scopusqualityQ1
dc.identifier.urihttps://doi.org/10.1038/s41598-022-09296-5
dc.identifier.urihttps://hdl.handle.net/20.500.11776/5013
dc.identifier.volume12
dc.identifier.wosWOS:000774204500065
dc.identifier.wosqualityQ2
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.institutionauthorKaplan, Selçuk
dc.language.isoen
dc.publisherNature Portfolio
dc.relation.ispartofScientific Reports
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectEnterococcus-Faecium
dc.subjectAntibiotic Usage
dc.subjectDairy-Cattle
dc.subjectFood
dc.subjectGene
dc.subjectBacteria
dc.subjectStrains
dc.subjectMilk
dc.subjectSusceptibility
dc.subjectDiversity
dc.titleAntimicrobial resistance determinants in silage
dc.typeArticle

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