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dc.contributor.authorBurhanoğlu, T.
dc.contributor.authorSürmeli, Yusuf
dc.contributor.authorŞanlı Mohamed, Gülşah
dc.date.accessioned2022-05-11T14:07:11Z
dc.date.available2022-05-11T14:07:11Z
dc.date.issued2020
dc.identifier.issn0141-8130
dc.identifier.urihttps://doi.org/10.1016/j.ijbiomac.2020.07.171
dc.identifier.urihttps://hdl.handle.net/20.500.11776/5003
dc.description.abstractIn this study, the heterologous expression and biochemical characterization of a thermostable ?-amylase from Geobacillus sp. GS33 was investigated. The recombinant ?-amylase was overexpressed in Escherichia coli BL21 (?DE) and purified via anion exchange and size-exclusion chromatography. The purified ?-amylase had a molecular weight of about 60 kDa, and was active in a broad range of pH 3–10 and temperature (40–90 °C) with maximum activity at pH 7–8 and 60 °C. The enzyme retained 50% residual activity at 65 °C, but only 20% at 85 °C after 16 h. At pH 9 and pH 7, the residual activity at 65 °C was 50% and 30%, respectively. The enzyme was remarkably activated by Co2+, Ca2+, Mg2+, PMSF, DTT, and Triton X-100, but partially inhibited by Cu2+, methanol, hexane, ethanol, acetone, SDS, and Tween 20. A molecular phylogeny analysis showed that the enzyme's amino acid sequence had the closest connection with an ?-amylase from Geobacillus thermoleovorans subsp. stromboliensis nov. 3D-structure-based amino acid sequence alignments revealed that the three catalytic residues (D217, E246, D314) and the four Ca2+ ion coordination residues (N143, E177, D186, H221) were conserved in ?-amylase from Geobacillus sp. GS33. The temperature stability and neutral pH optimum suggest that the enzyme may be useful for industrial applications. © 2020 Elsevier B.V.en_US
dc.description.sponsorshipThe authors would like to thank Biotechnology & Bioengineering Research Center at ?zmir Institute of Technology for the facilities and technical support.en_US
dc.language.isoengen_US
dc.publisherElsevier B.V.en_US
dc.identifier.doi10.1016/j.ijbiomac.2020.07.171
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectGeobacillusen_US
dc.subjectThermostabilityen_US
dc.subject?-Amylaseen_US
dc.subjectacetoneen_US
dc.subjectalcoholen_US
dc.subjectamylaseen_US
dc.subjectbenzylsulfonyl fluorideen_US
dc.subjectcalcium ionen_US
dc.subjectcobalten_US
dc.subjectcopper ionen_US
dc.subjectdithiothreitolen_US
dc.subjectdodecyl sulfate sodiumen_US
dc.subjecthexaneen_US
dc.subjectmagnesium ionen_US
dc.subjectmethanolen_US
dc.subjectpolysorbate 20en_US
dc.subjecttriton x 100en_US
dc.subjectamylaseen_US
dc.subjectbacterial proteinen_US
dc.subjectamino acid sequenceen_US
dc.subjectanion exchange chromatographyen_US
dc.subjectArticleen_US
dc.subjectcontrolled studyen_US
dc.subjectenzyme activationen_US
dc.subjectenzyme active siteen_US
dc.subjectenzyme activityen_US
dc.subjectenzyme inhibitionen_US
dc.subjectenzyme stabilityen_US
dc.subjectenzyme structureen_US
dc.subjectGeobacillusen_US
dc.subjectGeobacillus thermoleovoransen_US
dc.subjectmolecular phylogenyen_US
dc.subjectmolecular weighten_US
dc.subjectnonhumanen_US
dc.subjectnucleotide sequenceen_US
dc.subjectpHen_US
dc.subjectsequence alignmenten_US
dc.subjectsize exclusion chromatographyen_US
dc.subjecttemperatureen_US
dc.subjectthermostabilityen_US
dc.subjectchemistryen_US
dc.subjectenzymologyen_US
dc.subjectgeneticsen_US
dc.subjectGeobacillusen_US
dc.subjectheaten_US
dc.subjection exchange chromatographyen_US
dc.subjectmetabolismen_US
dc.subjectmolecular cloningen_US
dc.subjectmolecular evolutionen_US
dc.subjectmolecular modelen_US
dc.subjectphylogenyen_US
dc.subjectproceduresen_US
dc.subjectprotein conformationen_US
dc.subjectthermodynamicsen_US
dc.subjectalpha-Amylasesen_US
dc.subjectAmino Acid Sequenceen_US
dc.subjectBacterial Proteinsen_US
dc.subjectChromatography, Gelen_US
dc.subjectChromatography, Ion Exchangeen_US
dc.subjectCloning, Molecularen_US
dc.subjectEnzyme Stabilityen_US
dc.subjectEvolution, Molecularen_US
dc.subjectGeobacillusen_US
dc.subjectHot Temperatureen_US
dc.subjectHydrogen-Ion Concentrationen_US
dc.subjectModels, Molecularen_US
dc.subjectMolecular Weighten_US
dc.subjectPhylogenyen_US
dc.subjectProtein Conformationen_US
dc.subjectThermodynamicsen_US
dc.titleIdentification and characterization of novel thermostable ?-amylase from Geobacillus sp. GS33en_US
dc.typearticleen_US
dc.relation.ispartofInternational Journal of Biological Macromoleculesen_US
dc.departmentFakülteler, Ziraat Fakültesi, Tarımsal Biyoteknoloji Bölümüen_US
dc.identifier.volume164en_US
dc.identifier.startpage578en_US
dc.identifier.endpage585en_US
dc.institutionauthorSürmeli, Yusuf
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.authorscopusid57218225937
dc.authorscopusid55758999000
dc.authorscopusid36680469600
dc.identifier.wosWOS:000588093700054en_US
dc.identifier.scopus2-s2.0-85088394880en_US
dc.identifier.pmid32693140en_US


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